Pseudomonas aeruginosa PAO1, PA0041
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0004549 | tRNA-specific ribonuclease activity |
Inferred from Sequence Model
Term mapped from: InterPro:cd13442
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd13442 | CDI_toxin_Bp1026b_like | IPR033806 | CDI toxin, Bp1026b-like | 3397 | 3529 | 4.22491E-31 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1088 | 1126 | 0.0029 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 715 | 769 | 0.0029 |
| TIGRFAM | TIGR01901 | adhes_NPXG: filamentous hemagglutinin family N-terminal domain | IPR008638 | Filamentous haemagglutinin, N-terminal | 66 | 163 | 1.2E-17 |
| Pfam | PF18451 | Contact-dependent growth inhibition CdiA C-terminal domain | IPR040559 | tRNA nuclease CdiA, C-terminal | 3447 | 3524 | 2.3E-9 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1340 | 1380 | 3.6E-9 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1530 | 1571 | 8.5E-4 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1486 | 1529 | 0.082 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 2485 | 2531 | 25.0 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1662 | 1700 | 4.8E-4 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 770 | 809 | 4.7E-5 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1910 | 1983 | 0.12 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 216 | 292 | 2.8E-8 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 407 | 460 | 1.3E-6 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 585 | 625 | 1.1E-7 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 2041 | 2095 | 95.0 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 937 | 969 | 1.0 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1448 | 1521 | 0.14 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 606 | 644 | 3.4E-5 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 974 | 1048 | 0.0026 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1003 | 1042 | 4.7E-9 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 505 | 540 | 2.4E-6 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 2696 | 2837 | 1.1E-9 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1382 | 1421 | 2.6E-7 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 2626 | 2693 | 4.0E-6 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1296 | 1337 | 0.022 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1108 | 1148 | 4.0E-4 |
| Pfam | PF04830 | Possible hemagglutinin (DUF637) | IPR006915 | Domain of unknown function DUF637, haemagglutinin putative | 2969 | 3136 | 5.3E-47 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 462 | 501 | 0.019 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1905 | 1942 | 1.6E-6 |
| SMART | SM00912 | IPR008638 | Filamentous haemagglutinin, N-terminal | 47 | 168 | 9.0E-46 | |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 688 | 727 | 3.4E-4 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1190 | 1220 | 0.0023 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 2158 | 2185 | 100.0 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1045 | 1084 | 0.0066 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1219 | 1252 | 4.3E-5 |
| Pfam | PF05860 | haemagglutination activity domain | IPR008638 | Filamentous haemagglutinin, N-terminal | 33 | 166 | 6.1E-34 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1447 | 1484 | 2.3E-7 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 2511 | 2547 | 0.043 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 311 | 350 | 0.41 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1581 | 1613 | 0.49 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 2044 | 2083 | 0.007 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1254 | 1294 | 0.0016 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 589 | 644 | 3.6E-4 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 379 | 418 | 6.6E-5 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 471 | 540 | 0.022 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 2492 | 2531 | 6.7E-4 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 419 | 460 | 5.0E-7 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 958 | 1001 | 0.041 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 812 | 852 | 9.2E-7 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1066 | 1106 | 0.085 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 823 | 886 | 1.1E-6 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 542 | 582 | 2.3E-4 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 2580 | 2611 | 0.55 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1423 | 1464 | 0.09 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 729 | 769 | 8.0E-8 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1278 | 1338 | 3.0E-4 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1619 | 1678 | 4.8 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 853 | 892 | 2.9E-5 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1149 | 1185 | 2.4E-7 |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 2575 | 2614 | 32.0 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 895 | 935 | 1.9E-4 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1867 | 1903 | 6.7E-4 |
| SUPERFAMILY | SSF51126 | IPR011050 | Pectin lyase fold/virulence factor | 45 | 318 | 4.08E-59 | |
| Gene3D | G3DSA:2.160.20.10 | IPR012334 | Pectin lyase fold | 35 | 328 | 5.1E-100 | |
| Pfam | PF05594 | Haemagluttinin repeat | IPR008619 | Filamentous haemagglutinin repeat | 1343 | 1432 | 1.8E-6 |
| TIGRFAM | TIGR01731 | fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) | IPR010069 | Filamentous haemagglutinin, 20-residue x2 repeat | 1413 | 1443 | 0.081 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.