Pseudomonas aeruginosa PAO1, PA0041

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004549 tRNA-specific ribonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd13442
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd13442 CDI_toxin_Bp1026b_like IPR033806 CDI toxin, Bp1026b-like 3397 3529 4.22491E-31
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1088 1126 0.0029
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 715 769 0.0029
TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain IPR008638 Filamentous haemagglutinin, N-terminal 66 163 1.2E-17
Pfam PF18451 Contact-dependent growth inhibition CdiA C-terminal domain IPR040559 tRNA nuclease CdiA, C-terminal 3447 3524 2.3E-9
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1340 1380 3.6E-9
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1530 1571 8.5E-4
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1486 1529 0.082
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 2485 2531 25.0
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1662 1700 4.8E-4
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 770 809 4.7E-5
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 1910 1983 0.12
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 216 292 2.8E-8
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 407 460 1.3E-6
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 585 625 1.1E-7
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 2041 2095 95.0
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 937 969 1.0
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 1448 1521 0.14
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 606 644 3.4E-5
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 974 1048 0.0026
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1003 1042 4.7E-9
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 505 540 2.4E-6
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 2696 2837 1.1E-9
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1382 1421 2.6E-7
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 2626 2693 4.0E-6
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1296 1337 0.022
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1108 1148 4.0E-4
Pfam PF04830 Possible hemagglutinin (DUF637) IPR006915 Domain of unknown function DUF637, haemagglutinin putative 2969 3136 5.3E-47
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 462 501 0.019
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1905 1942 1.6E-6
SMART SM00912 IPR008638 Filamentous haemagglutinin, N-terminal 47 168 9.0E-46
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 688 727 3.4E-4
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1190 1220 0.0023
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 2158 2185 100.0
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1045 1084 0.0066
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1219 1252 4.3E-5
Pfam PF05860 haemagglutination activity domain IPR008638 Filamentous haemagglutinin, N-terminal 33 166 6.1E-34
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1447 1484 2.3E-7
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 2511 2547 0.043
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 311 350 0.41
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1581 1613 0.49
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 2044 2083 0.007
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1254 1294 0.0016
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 589 644 3.6E-4
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 379 418 6.6E-5
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 471 540 0.022
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 2492 2531 6.7E-4
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 419 460 5.0E-7
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 958 1001 0.041
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 812 852 9.2E-7
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1066 1106 0.085
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 823 886 1.1E-6
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 542 582 2.3E-4
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 2580 2611 0.55
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1423 1464 0.09
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 729 769 8.0E-8
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 1278 1338 3.0E-4
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 1619 1678 4.8
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 853 892 2.9E-5
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1149 1185 2.4E-7
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 2575 2614 32.0
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 895 935 1.9E-4
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1867 1903 6.7E-4
SUPERFAMILY SSF51126 IPR011050 Pectin lyase fold/virulence factor 45 318 4.08E-59
Gene3D G3DSA:2.160.20.10 IPR012334 Pectin lyase fold 35 328 5.1E-100
Pfam PF05594 Haemagluttinin repeat IPR008619 Filamentous haemagglutinin repeat 1343 1432 1.8E-6
TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat 1413 1443 0.081

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.