Pseudomonas aeruginosa PAO1, PA0089 (tssG1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| PseudoCAP | Hcp secretion island I (HSI-I) type VI secretion system |
ECO:0000037
not_recorded |
|||
| KEGG | pae02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF06996 | Type VI secretion, TssG | IPR010732 | Type VI secretion, TssG-like | 21 | 319 | 7.8E-109 |
| NCBIfam | TIGR03347 | JCVI: type VI secretion system baseplate subunit TssG | IPR010732 | Type VI secretion, TssG-like | 22 | 319 | 3.3E-110 |
| PANTHER | PTHR35564 | - | IPR010732 | Type VI secretion, TssG-like | 5 | 333 | 1.2E-126 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.