Pseudomonas aeruginosa PAO1, PA0091 (vgrG1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0033104 type VI protein secretion system complex
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
21325275 Reviewed by curator
Cellular Component GO:0033104 type VI protein secretion system complex
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
20114026 Reviewed by curator
Biological Process GO:0033103 protein secretion by the type VI secretion system
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
21325275 Reviewed by curator
Cellular Component GO:0033104 type VI protein secretion system complex
IGC
Inferred from Genomic Context

16763151 Reviewed by curator
Biological Process GO:0033103 protein secretion by the type VI secretion system
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
20114026 Reviewed by curator
Biological Process GO:0033103 protein secretion by the type VI secretion system
IGC
Inferred from Genomic Context

16763151 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.50.230 IPR037026 Vgr protein, OB-fold domain superfamily 352 454 3.3E-50
Gene3D G3DSA:3.30.1920.30 221 283 0.0
SUPERFAMILY SSF69255 362 449 1.15E-35
TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 8 520 0.0
SUPERFAMILY SSF69349 439 623 7.69E-42
Gene3D G3DSA:2.30.110.50 11 330 0.0
Gene3D G3DSA:3.55.50.10 95 186 0.0
SUPERFAMILY SSF69279 187 360 4.42E-36
SUPERFAMILY SSF69279 8 181 2.38E-62
Pfam PF05954 Phage late control gene D protein (GPD) 26 327 4.8E-104
TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 20 503 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.