Pseudomonas aeruginosa PAO1, PA0167

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0045892 negative regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08362
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 49 72 1.3E-6
Pfam PF08362 YcdC-like protein, C-terminal region IPR013573 Transcription regulator YcdC, C-terminal 75 216 1.7E-53
ProSiteProfiles PS50977 TetR-type HTH domain profile. IPR001647 DNA-binding HTH domain, TetR-type 22 82 19.278
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 16 95 6.67E-18
SUPERFAMILY SSF48498 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily 92 216 2.19E-43
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 28 41 1.3E-6
Gene3D G3DSA:1.10.357.10 75 215 3.5E-51
Pfam PF00440 Bacterial regulatory proteins, tetR family IPR001647 DNA-binding HTH domain, TetR-type 28 74 5.6E-13
Gene3D G3DSA:1.10.10.60 8 74 7.3E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.