Pseudomonas aeruginosa PAO1, PA0172 (siaA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF07228
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016021 | integral component of membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF00672
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0007165 | signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:PF00672
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG (InterPro) | 04660 | T cell receptor signaling pathway | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
| KEGG (InterPro) | 04658 | Th1 and Th2 cell differentiation | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| ProSiteProfiles | PS50885 | HAMP domain profile. | IPR003660 | HAMP domain | 337 | 389 | 11.157 |
| Coils | Coil | 384 | 415 | - | |||
| Pfam | PF00672 | HAMP domain | IPR003660 | HAMP domain | 337 | 386 | 9.8E-14 |
| Gene3D | G3DSA:1.20.1480.50 | 306 | 396 | 6.2E-14 | |||
| SUPERFAMILY | SSF158472 | 337 | 386 | 1.01E-9 | |||
| SMART | SM00304 | IPR003660 | HAMP domain | 337 | 389 | 4.0E-14 | |
| CDD | cd06225 | HAMP | IPR003660 | HAMP domain | 349 | 386 | 1.04408E-6 |
| Pfam | PF07228 | Stage II sporulation protein E (SpoIIE) | IPR001932 | PPM-type phosphatase domain | 466 | 663 | 1.1E-24 |
| Gene3D | G3DSA:3.60.40.10 | IPR036457 | PPM-type phosphatase domain superfamily | 404 | 661 | 4.6E-53 | |
| SMART | SM00331 | IPR001932 | PPM-type phosphatase domain | 453 | 662 | 1.4E-9 | |
| SUPERFAMILY | SSF81606 | IPR036457 | PPM-type phosphatase domain superfamily | 448 | 659 | 4.71E-6 | |
| CDD | cd18774 | PDC2_HK_sensor | 192 | 301 | 0.00293757 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.