Pseudomonas aeruginosa PAO1, PA0211 (mdcD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044248 cellular catabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0015976 carbon utilization
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0044262 cellular carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03133
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016831 carboxy-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03133
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00254 Aflatoxin biosynthesis InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00620 Pyruvate metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
UniPathway UPA00655 malonyl-CoA biosynthesis InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00720 Carbon fixation pathways in prokaryotes InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00061 Fatty acid biosynthesis InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00640 Propanoate metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00253 Tetracycline biosynthesis InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01039 Carboxyl transferase domain IPR034733 Acetyl-CoA carboxylase 18 235 1.8E-14
TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit IPR017556 Biotin-independent malonate decarboxylase, beta subunit 11 281 3.2E-117
ProSiteProfiles PS50980 Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal 1 255 21.994
SUPERFAMILY SSF52096 IPR029045 ClpP/crotonase-like domain superfamily 4 236 8.71E-37
Gene3D G3DSA:3.90.226.10 3 240 3.8E-50

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.