Pseudomonas aeruginosa PAO1, PA0235 (pcaK)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019439 aromatic compound catabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0044248 cellular catabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0015976 carbon utilization
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Cellular Component GO:0016020 membrane
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0006810 transport
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Cellular Component GO:0005887 integral component of plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00217
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00217
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00217
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Aromatic compound catabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile. IPR020846 Major facilitator superfamily domain 30 447 49.83
ProSitePatterns PS00217 Sugar transport proteins signature 2. IPR005829 Sugar transporter, conserved site 126 151 -
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 35 405 2.1E-43
Gene3D G3DSA:1.20.1250.20 260 441 8.3E-21
ProSitePatterns PS00216 Sugar transport proteins signature 1. IPR005829 Sugar transporter, conserved site 84 100 -
Gene3D G3DSA:1.20.1250.20 19 234 1.3E-43
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 14 438 2.22E-79
TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family 13 412 0.0
CDD cd17365 MFS_PcaK_like 31 421 7.56699E-111

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.