Pseudomonas aeruginosa PAO1, PA0236

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF09339	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF09339	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00346	iclrneu	IPR005471	Transcription regulator IclR, N-terminal	2	93	1.2E-19
SUPERFAMILY	SSF55781	GAF domain-like	-	-	70	251	1.63E-38
FunFam	G3DSA:3.30.450.40:FF:000084	IclR family transcriptional regulator	-	-	72	256	1.9E-111
Gene3D	G3DSA:3.30.450.40	-	IPR029016	GAF-like domain superfamily	72	256	2.2E-42
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	6	76	1.07E-17
Pfam	PF09339	IclR helix-turn-helix domain	IPR005471	Transcription regulator IclR, N-terminal	6	56	2.0E-17
FunFam	G3DSA:1.10.10.10:FF:000056	IclR family transcriptional regulator	-	-	2	73	1.3E-22
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	4	71	4.0E-20
PANTHER	PTHR30136	HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY	-	-	6	255	5.6E-56
Pfam	PF01614	Bacterial transcriptional regulator	IPR014757	Transcription regulator IclR, C-terminal	123	250	1.1E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.