Pseudomonas aeruginosa PAO1, PA0330 (rpiA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009052 pentose-phosphate shunt, non-oxidative branch
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00170
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004751 ribose-5-phosphate isomerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00170
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00030 Pentose phosphate pathway 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Carbon fixation ECO:0000037
not_recorded
KEGG pae01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
PseudoCAP Pentose phosphate cycle ECO:0000037
not_recorded
KEGG pae01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc PENTOSE-P-PWY pentose phosphate pathway 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.70.260:FF:000004 Ribose-5-phosphate isomerase A - - 129 200 2.3E-40
FunFam G3DSA:3.40.50.1360:FF:000001 Ribose-5-phosphate isomerase A - - 6 141 2.1E-45
NCBIfam TIGR00021 JCVI: ribose 5-phosphate isomerase A IPR004788 Ribose 5-phosphate isomerase, type A 7 219 2.8E-64
Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IPR004788 Ribose 5-phosphate isomerase, type A 53 217 5.0E-57
SUPERFAMILY SSF75445 D-ribose-5-phosphate isomerase (RpiA), lid domain - - 131 202 7.98E-24
CDD cd01398 RPI_A IPR004788 Ribose 5-phosphate isomerase, type A 6 214 2.00316E-97
Gene3D G3DSA:3.30.70.260 - - - 129 200 8.7E-82
Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. IPR020672 Ribose-5-phosphate isomerase, type A, subgroup 3 221 33.60857
PANTHER PTHR11934 RIBOSE-5-PHOSPHATE ISOMERASE IPR004788 Ribose 5-phosphate isomerase, type A 2 221 1.3E-63
Gene3D G3DSA:3.40.50.1360 - - - 6 211 8.7E-82
SUPERFAMILY SSF100950 NagB/RpiA/CoA transferase-like IPR037171 NagB/RpiA transferase-like 1 150 2.7E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.