Pseudomonas aeruginosa PAO1, PA0515

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00344
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class
Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class
Transcriptional regulators Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Denitrification ECO:0000037
not_recorded
PseudoCAP Biosynthesis of heme d1 ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF17805 AsnC-like ligand binding domain IPR040523 AsnC-like ligand binding domain 64 132 1.5E-20
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 1 52 3.5E-7
Pfam PF13404 AsnC-type helix-turn-helix domain IPR000485 AsnC-type HTH domain 1 45 2.6E-8
SMART SM00344 IPR019888 Transcription regulator AsnC-type 1 108 0.0059
Gene3D G3DSA:3.30.70.3460 64 141 5.9E-20
Coils Coil 77 97 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.