Pseudomonas aeruginosa PAO1, PA0516 (nirF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006091 generation of precursor metabolites and energy
IDA
Inferred from Direct Assay
ECO:0000002
direct assay evidence
Biological Process GO:0051188 cofactor biosynthetic process
IDA
Inferred from Direct Assay
ECO:0000002
direct assay evidence

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class
Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Biosynthesis of heme d1 ECO:0000037
not_recorded
PseudoCAP Denitrification ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF51004 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily 26 390 3.66E-75
Pfam PF02239 Cytochrome D1 heme domain 25 386 2.9E-147
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 5.0
Gene3D G3DSA:2.140.10.20 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily 19 390 7.6E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.