Pseudomonas aeruginosa PAO1, PA0520 (nirQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Anr box 580224 580237 +
7765251 Details
Fnr-binding site upstream of denA 580211 580241 -
1849489 Details
Shine-Dalgarno sequence 580108 580112 - ECO:0000256
match to sequence model evidence used in automatic assertion
Details
Shine-Dalgarno sequence 580305 580309 + ECO:0000256
match to sequence model evidence used in automatic assertion
Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: AGGACACCAC-N91-GTGGTGTCCT 580629 580739 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: CGCAGCGCCTGG-N10-CCAGGCGCTGCG 580881 580914 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: CAGCCGGAGCTG-N62-CAGCTCCGGCTG 581208 581293 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details