Pseudomonas aeruginosa PAO1, PA0521

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Inverted repeat: AGGACACCAC-N91-GTGGTGTCCT 580629 580739 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: CGCAGCGCCTGG-N10-CCAGGCGCTGCG 580881 580914 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: CAGCCGGAGCTG-N62-CAGCTCCGGCTG 581208 581293 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
DNR binding site 581944 581957 + ECO:0000314
direct assay evidence used in manual assertion
24157832 Details
Inverted repeat: GGCCAGGAACA-N33-TGTTCCTGGCC 582041 582095 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Shine-Dalgarno sequence 582005 582010 + ECO:0000256
match to sequence model evidence used in automatic assertion
Details