Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0009896 | positive regulation of catabolic process | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
19406895 | Reviewed by curator |
Molecular Function | GO:0003700 | DNA-binding transcription factor activity | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
19406895 | Reviewed by curator |
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 91 | 289 | 4.7E-43 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 1 | 84 | 1.18E-23 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 39 | 50 | 1.1E-8 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 18 | 29 | 1.1E-8 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 29 | 39 | 1.1E-8 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 1 | 84 | 2.3E-25 |
CDD | cd08440 | PBP2_LTTR_like_4 | - | - | 92 | 288 | 4.05242E-72 |
PANTHER | PTHR30419 | HTH-TYPE TRANSCRIPTIONAL REGULATOR YBHD | - | - | 1 | 293 | 3.0E-82 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 84 | 1.8E-26 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 91 | 290 | 6.03E-40 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 93 | 293 | 5.6E-46 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 4 | 62 | 6.4E-22 |