Pseudomonas aeruginosa PAO1, PA2000 (dhcB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0042413	carnitine catabolic process	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	19406895	Reviewed by curator
Molecular Function	GO:0008410	CoA-transferase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00882	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other PAO1 genes in this class Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae00072	Synthesis and degradation of ketone bodies	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
PseudoCAP		Valine, leucine and isoleucine degradation		ECO:0000037 not_recorded
KEGG	pae00650	Butanoate metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
PseudoCyc	PWYB-96	Carnitine Catabolism to Glycine Betaine	19.5	ECO:0000250 sequence similarity evidence used in manual assertion	12867747
KEGG	pae00280	Valine, leucine and isoleucine degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
PseudoCAP		Butanoate metabolism		ECO:0000037 not_recorded

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:3.40.1080.10:FF:000001	Succinyl-coa:3-ketoacid-coenzyme a transferase subunit b	-	-	2	214	2.5E-105
Pfam	PF01144	Coenzyme A transferase	IPR004165	Coenzyme A transferase family I	6	201	7.4E-42
SMART	SM00882	CoA_trans_3	IPR004165	Coenzyme A transferase family I	6	202	5.8E-72
Gene3D	G3DSA:3.40.1080.10	-	-	-	1	213	9.8E-99
NCBIfam	TIGR02428	JCVI: 3-oxoacid CoA-transferase subunit B	IPR012791	3-oxoacid CoA-transferase, subunit B	4	208	3.9E-98
PANTHER	PTHR13707	KETOACID-COENZYME A TRANSFERASE	IPR004165	Coenzyme A transferase family I	4	216	1.6E-92
SUPERFAMILY	SSF100950	NagB/RpiA/CoA transferase-like	IPR037171	NagB/RpiA transferase-like	4	216	3.27E-74

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.