Pseudomonas aeruginosa PAO1, PA2771

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0052621 diguanylate cyclase activity
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
27388857 Reviewed by curator
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01590
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Motility & Attachment Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF55781 GAF domain-like - - 29 168 5.23E-26
FunFam G3DSA:3.30.450.40:FF:000057 Two-component system sensor molecule - - 23 164 6.7E-67
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 176 340 1.1E-44
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 178 339 5.1E-45
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 15 173 1.1E-17
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 176 340 1.4E-53
SMART SM00065 gaf_1 IPR003018 GAF domain 26 168 1.2E-9
CDD cd01949 GGDEF IPR000160 GGDEF domain 184 339 8.7075E-49
Pfam PF01590 GAF domain IPR003018 GAF domain 31 138 5.6E-11
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 182 337 2.3E-42
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 186 339 7.45E-45
Coils Coil Coil - - 160 180 -
SMART SM00267 duf1_3 IPR000160 GGDEF domain 170 341 5.2E-50
PANTHER PTHR43102 SLR1143 PROTEIN - - 2 273 1.1E-56

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.