Pseudomonas aeruginosa PAO1, PA2851 (efp)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0043043 peptide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05794
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003746 translation elongation factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00038
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006414 translational elongation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00038
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00038
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF005901 EF-P IPR020599 Translation elongation factor P/YeiP 1 187 3.3E-57
Gene3D G3DSA:2.30.30.30 - IPR014722 Large ribosomal subunit protein uL2, domain 2 1 63 2.5E-25
SUPERFAMILY SSF50249 Nucleic acid-binding proteins IPR012340 Nucleic acid-binding, OB-fold 130 186 6.17E-15
SMART SM01185 EFP_2 IPR001059 Translation elongation factor P/YeiP, central 67 122 3.1E-14
FunFam G3DSA:2.40.50.140:FF:000009 Elongation factor P - - 64 128 1.4E-19
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 64 128 6.9E-21
SUPERFAMILY SSF50104 Translation proteins SH3-like domain IPR008991 Translation protein SH3-like domain superfamily 1 62 5.48E-17
SUPERFAMILY SSF50249 Nucleic acid-binding proteins IPR012340 Nucleic acid-binding, OB-fold 65 128 1.67E-12
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 129 188 7.4E-24
SMART SM00841 Elong_fact_P_C_2 IPR015365 Elongation factor P, C-terminal 130 185 7.5E-25
Pfam PF08207 Elongation factor P (EF-P) KOW-like domain IPR013185 Translation elongation factor, KOW-like 3 60 5.0E-22
CDD cd04470 S1_EF-P_repeat_1 IPR001059 Translation elongation factor P/YeiP, central 66 127 3.66579E-17
NCBIfam TIGR00038 JCVI: elongation factor P IPR011768 Translation elongation factor P 3 186 2.9E-60
FunFam G3DSA:2.30.30.30:FF:000003 Elongation factor P - - 1 63 5.4E-23
FunFam G3DSA:2.40.50.140:FF:000004 Elongation factor P - - 129 187 9.9E-24
CDD cd05794 S1_EF-P_repeat_2 IPR015365 Elongation factor P, C-terminal 130 185 7.3824E-19
Hamap MF_00141 Elongation factor P [efp]. IPR011768 Translation elongation factor P 1 186 48.489731
PANTHER PTHR30053 ELONGATION FACTOR P IPR020599 Translation elongation factor P/YeiP 3 185 2.8E-44
Pfam PF09285 Elongation factor P, C-terminal IPR015365 Elongation factor P, C-terminal 130 185 8.0E-21
Pfam PF01132 Elongation factor P (EF-P) OB domain IPR001059 Translation elongation factor P/YeiP, central 68 122 1.7E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.