Pseudomonas aeruginosa PAO1, PA2987 (lolD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044874 lipoprotein localization to outer membrane
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 17350955 Reviewed by curator
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02211
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0044873 lipoprotein localization to membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02211
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 35 223 1.8E-15
FunFam G3DSA:3.40.50.300:FF:000230 Lipoprotein-releasing system ATP-binding protein LolD - - 2 227 3.8E-108
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 26 174 9.2E-34
CDD cd03255 ABC_MJ0796_LolCDE_FtsE IPR017911 MacB, ATP-binding domain 7 224 3.03047E-114
PANTHER PTHR24220 IMPORT ATP-BINDING PROTEIN IPR015854 ABC transporter, lipoprotein release, LolD-like 4 226 4.3E-68
NCBIfam TIGR02211 JCVI: lipoprotein-releasing ABC transporter ATP-binding protein LolD IPR011924 Lipoprotein releasing system, ATP-binding protein 6 225 1.2E-97
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 6 225 1.73E-69
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 227 1.6E-71

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.