Pseudomonas aeruginosa PAO1, PA3038 (opdQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071453 cellular response to oxygen levels
IDA
Inferred from Direct Assay
ECO:0000231
quantitative polymerase chain reaction evidence
26459101 Reviewed by curator
Biological Process GO:0010167 response to nitrate
IDA
Inferred from Direct Assay
ECO:0000231
quantitative polymerase chain reaction evidence
26459101 Reviewed by curator
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03573
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:2.40.160.10:FF:000008 OprD family porin - - 23 421 0.0
Gene3D G3DSA:2.40.160.10 Porin IPR023614 Porin domain superfamily 3 421 0.0
PANTHER PTHR34596 CHITOPORIN IPR005318 Outer membrane porin, bacterial 3 421 0.0
Pfam PF03573 outer membrane porin, OprD family IPR005318 Outer membrane porin, bacterial 28 419 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.