Pseudomonas aeruginosa PAO1, PA3038 (opdQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Shine-Dalgarno sequence | 3400670 | 3400674 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details | |
| transcription initiation site | 3400613 | 3400613 | + |
ECO:0001820
|
26459101 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CCAGAGCGGC-N98-GCCGCTCTGG | 3401829 | 3401946 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAGAGGCCACCC-N2-GGGTGGCCTCTT | 3402015 | 3402040 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 758 | 3402017 | 3402038 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |