Pseudomonas aeruginosa PAO1, PA3167 (serC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0008615 pyridoxine biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
8706854 Reviewed by curator
Biological Process GO:0009070 serine family amino acid biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
8706854 Reviewed by curator
Biological Process GO:0006520 cellular amino acid metabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0051188 obsolete cofactor biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0006564 L-serine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00611
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004648 O-phospho-L-serine:2-oxoglutarate aminotransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00611
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class
Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc SERSYN-PWY L-serine biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Glycine, serine and threonine metabolism ECO:0000037
not_recorded
KEGG pae01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Vitamin B6 metabolism ECO:0000037
not_recorded
KEGG pae00260 Glycine, serine and threonine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc SER-GLYSYN-PWY superpathway of L-serine and glycine biosynthesis I 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae00750 Vitamin B6 metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00680 Methane metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00266 Aminotransferase class-V IPR000192 Aminotransferase class V domain 6 349 2.2E-49
FunFam G3DSA:3.90.1150.10:FF:000006 Phosphoserine aminotransferase - - 258 361 4.4E-42
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 18 251 1.8E-92
Hamap MF_00160 Phosphoserine aminotransferase [serC]. IPR022278 Phosphoserine aminotransferase 3 360 51.861275
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 4 359 8.61E-118
NCBIfam TIGR01364 JCVI: phosphoserine transaminase IPR022278 Phosphoserine aminotransferase 6 360 0.0
PANTHER PTHR43247 PHOSPHOSERINE AMINOTRANSFERASE IPR022278 Phosphoserine aminotransferase 2 360 0.0
PIRSF PIRSF000525 SerC IPR022278 Phosphoserine aminotransferase 1 361 0.0
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 252 361 1.1E-48
CDD cd00611 PSAT_like IPR022278 Phosphoserine aminotransferase 6 358 0.0
FunFam G3DSA:3.40.640.10:FF:000010 Phosphoserine aminotransferase - - 17 257 2.3E-110

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.