Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3173
|
Name |
Synonym: yciK |
Replicon | chromosome |
Genomic location | 3563546 - 3564286 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_251863.1 |
GI | 15598369 |
Affymetrix | PA3173_at |
Entrez | 882633 |
GenBank | AAG06561.1 |
INSDC | AAG06561.1 |
NCBI Locus Tag | PA3173 |
protein_id(GenBank) | gb|AAG06561.1|AE004741_6|gnl|PseudoCAP|PA3173 |
TIGR | NTL03PA03173 |
UniParc | UPI00000C5935 |
UniProtKB Acc | Q9HZ61 |
UniProtKB ID | Q9HZ61_PSEAE |
UniRef100 | UniRef100_Q9HZ61 |
UniRef50 | UniRef50_G2FE54 |
UniRef90 | UniRef90_A0A072ZRY7 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable short-chain dehydrogenase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -6.80 |
Kyte-Doolittle Hydrophobicity Value | -0.031 |
Molecular Weight (kDa) | 26.3 |
Isoelectric Point (pI) | 4.87 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | Victors : 4269 |
Category | |
Evidence |
ECO:0000315
mutant phenotype evidence used in manual assertion
|
Host Organism | Rattus norvegicus |
Notes | |
Infection model | Rat agar bead model of chronic lung infection |
Reference | 14641575 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 646 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002442 (534 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3173
Search term: probable short-chain dehydrogenase
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213]
E-value:
1.1e-12
Percent Identity:
31.7
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213]
E-value:
1.1e-12
Percent Identity:
31.7
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213]
E-value:
1.1e-12
Percent Identity:
31.7
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213]
E-value:
1.1e-12
Percent Identity:
31.7
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213]
E-value:
1.1e-12
Percent Identity:
31.7
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213]
E-value:
1.1e-12
Percent Identity:
31.7
|