Pseudomonas aeruginosa PAO1, PA3357 (dsdA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0031363	N-terminal protein amino acid deamination	ISS Inferred from Sequence or Structural Similarity	ECO:0000250 sequence similarity evidence used in manual assertion	3053699	Reviewed by curator
Molecular Function	GO:0008721	D-serine ammonia-lyase activity	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	26957519	Reviewed by curator
Biological Process	GO:0006520	cellular amino acid metabolic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Biological Process	GO:0046416	D-amino acid metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02035	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0008721	D-serine ammonia-lyase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02035	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0030170	pyridoxal phosphate binding	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02035	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Glycine, serine and threonine metabolism		ECO:0000037 not_recorded
KEGG	pae00260	Glycine, serine and threonine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR48078	THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED	-	-	80	444	5.3E-39
Gene3D	G3DSA:3.40.50.1100	-	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	14	441	0.0
Hamap	MF_01030	D-serine dehydratase [dsdA].	IPR011780	D-serine ammonia-lyase	1	448	259.428223
SUPERFAMILY	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	98	440	5.62E-55
Pfam	PF00291	Pyridoxal-phosphate dependent enzyme	IPR001926	Tryptophan synthase beta chain-like, PALP domain	97	398	2.7E-57
NCBIfam	TIGR02035	JCVI: D-serine ammonia-lyase	IPR011780	D-serine ammonia-lyase	10	440	0.0
Gene3D	G3DSA:3.40.50.1100	-	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	117	239	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.