Pseudomonas aeruginosa PAO1, PA3361 (lecB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
transcription initiation site 3772905 3772905 +
20348252 Details
Shine-Dalgarno sequence 3773017 3773022 +
20348252 Details
putative lux box 3772853 3772872 +
20348252 Details
Inverted repeat: GTCGCCGCAGCGG-N72-CCGCTGCGGCGAC 3772594 3772691 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Shine-Dalgarno sequence 3772572 3772575 - ECO:0000256
match to sequence model evidence used in automatic assertion
Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: GGGATGGCGGC-N2-GCCGCCATCCC 3773392 3773415 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 850 3773392 3773415 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details