Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0042121 | alginic acid biosynthetic process | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
15489449 | Reviewed by curator |
Biological Process | GO:0042121 | alginic acid biosynthetic process | Inferred from Mutant Phenotype | ECO:0000015 mutant phenotype evidence |
8550492 | Reviewed by curator |
Biological Process | GO:0044010 | single-species biofilm formation | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
15489449 | Reviewed by curator |
Biological Process | GO:0050896 | response to stimulus | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
15489449 | Reviewed by curator |
Cellular Component | GO:0009276 | Gram-negative-bacterium-type cell wall | Inferred from Direct Assay | ECO:0000002 direct assay evidence |
||
Cellular Component | GO:0042597 | periplasmic space | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
15489449 | Reviewed by curator |
Biological Process | GO:0042121 | alginic acid biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:cd14441
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
PseudoCAP | Alginate biosynthesis |
ECO:0000037
not_recorded |
|||
PseudoCyc | PWY-6082 | alginate biosynthesis | 19.5 |
ECO:0000250
sequence similarity evidence used in manual assertion |
12867747 |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
CDD | cd14487 | AlgX_C | IPR031798 | Alginate biosynthesis protein AlgX, C-terminal carbohydrate-binding module | 337 | 461 | 4.2595E-60 |
Gene3D | G3DSA:2.60.120.1380 | - | IPR038639 | AlgX, C-terminal domain superfamily | 346 | 463 | 5.1E-46 |
Pfam | PF16824 | C-terminal carbohydrate-binding module | IPR031798 | Alginate biosynthesis protein AlgX, C-terminal carbohydrate-binding module | 346 | 467 | 4.6E-59 |
CDD | cd14441 | AlgX_N | IPR034655 | Alginate biosynthesis protein AlgX, N-terminal | 43 | 348 | 0.0 |
Pfam | PF16822 | SGNH hydrolase-like domain, acetyltransferase AlgX | IPR031811 | AlgX/AlgJ, SGNH hydrolase-like domain | 64 | 325 | 1.1E-82 |