Pseudomonas aeruginosa PAO1, PA3549 (algJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0042121 alginic acid biosynthetic process
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 8636017 Reviewed by curator
Biological Process GO:0051979 alginic acid acetylation
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 8636017 Reviewed by curator
Biological Process GO:0051979 alginic acid acetylation
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 12003941 Reviewed by curator
Biological Process GO:0050896 response to stimulus
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 8636017 Reviewed by curator
Cellular Component GO:0009276 Gram-negative-bacterium-type cell wall
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Biological Process GO:0042121 alginic acid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd14442
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other PAO1 genes in this class
Cell wall / LPS / capsule Other PAO1 genes in this class
Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Alginate biosynthesis ECO:0000037
not_recorded
PseudoCyc PWY-6082 alginate biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 259 286 -
Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain 85 355 2.0E-96
CDD cd14442 AlgJ_like IPR034657 Alginate O-acetyltranferase AlgJ 47 374 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.