Pseudomonas aeruginosa PAO1, PA3879 (narL)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006091	generation of precursor metabolites and energy	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Biological Process	GO:0006807	nitrogen compound metabolic process	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Biological Process	GO:0000160	phosphorelay signal transduction system	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00448	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00038	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other PAO1 genes in this class Energy metabolism Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Nitrogen metabolism		ECO:0000037 not_recorded
PseudoCAP		Two-component System		ECO:0000037 not_recorded
KEGG	pae02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR43214	TWO-COMPONENT RESPONSE REGULATOR	IPR039420	Transcriptional regulatory protein WalR-like	5	216	8.6E-63
SMART	SM00421	luxrmega5	IPR000792	Transcription regulator LuxR, C-terminal	156	213	8.2E-28
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	173	189	1.1E-13
CDD	cd06170	LuxR_C_like	IPR000792	Transcription regulator LuxR, C-terminal	159	215	1.14511E-19
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	12	125	3.8E-34
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	159	173	1.1E-13
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	11	143	4.55E-37
CDD	cd19931	REC_NarL	-	-	14	130	7.76199E-66
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	15	126	8.6E-31
Gene3D	G3DSA:3.40.50.2300	-	-	-	12	219	2.5E-69
SUPERFAMILY	SSF46894	C-terminal effector domain of the bipartite response regulators	IPR016032	Signal transduction response regulator, C-terminal effector	146	218	1.84E-22
Pfam	PF00196	Bacterial regulatory proteins, luxR family	IPR000792	Transcription regulator LuxR, C-terminal	158	213	1.2E-21
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	189	201	1.1E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.