Pseudomonas aeruginosa PAO1, PA4358 (feoB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGCCGCCAGC-N17-GCTGGCGGCG | 4887678 | 4887714 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Shine-Dalgarno sequence | 4887514 | 4887516 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Fur binding site | 4885993 | 4886011 | - |
ECO:0000314
direct assay evidence used in manual assertion |
12207696 | Details |
| Inverted repeat: CACCAGCAGG-N70-CCTGCTGGTG | 4886398 | 4886487 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGTTGACCAGC-N68-GCTGGTCAACG | 4886988 | 4887077 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCATCGGCGT-N86-ACGCCGATGC | 4884412 | 4884517 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: AGAGCCCGCCACG-N5-CGTGGCGGGCTCT | 4884675 | 4884705 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1109 | 4884672 | 4884709 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 1110 | 4884676 | 4884704 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 1111 | 4884676 | 4884704 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 1112 | 4884678 | 4884702 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |