Pseudomonas aeruginosa PAO1, PA4496 (dppA1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0042277 peptide binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA14_58350
ECO:0000250
sequence similarity evidence used in manual assertion
25338022 Reviewed by curator
Molecular Function GO:0071916 dipeptide transmembrane transporter activity
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
25338022 Reviewed by curator
Biological Process GO:0042938 dipeptide transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA14_58350
ECO:0000250
sequence similarity evidence used in manual assertion
25338022 Reviewed by curator
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 - - - 211 524 0.0
CDD cd08493 PBP2_DppA_like - - 31 520 0.0
Gene3D G3DSA:3.90.76.10 - - - 45 210 0.0
PIRSF PIRSF002741 MppA IPR030678 Peptide/nickel binding protein, MppA-type 22 535 1.6E-118
PANTHER PTHR30290 PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER IPR039424 Solute-binding protein family 5 33 530 5.4E-113
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 32 534 0.0
FunFam G3DSA:3.90.76.10:FF:000002 Dipeptide ABC transporter, substrate-binding protein - - 51 211 4.1E-76
FunFam G3DSA:3.40.190.10:FF:000036 Dipeptide ABC transporter, substrate-binding protein - - 212 299 6.3E-29
Gene3D G3DSA:3.10.105.10 - - - 293 510 0.0
FunFam G3DSA:3.10.105.10:FF:000002 Dipeptide ABC transporter, substrate-binding protein - - 294 511 8.2E-110
Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IPR000914 Solute-binding protein family 5 domain 75 454 3.7E-102

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.