Pseudomonas aeruginosa PAO1, PA4497 (dppA2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0071916 dipeptide transmembrane transporter activity
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 25338022 Reviewed by curator
Biological Process GO:0042938 dipeptide transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA14_58360
 ECO:0000250
sequence similarity evidence used in manual assertion		 25338022 Reviewed by curator
Molecular Function GO:0042277 peptide binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA14_58360
 ECO:0000250
sequence similarity evidence used in manual assertion		 25338022 Reviewed by curator
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IPR000914 Solute-binding protein family 5 domain 71 449 2.2E-98
PANTHER PTHR30290 PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER IPR039424 Solute-binding protein family 5 14 523 3.5E-109
PIRSF PIRSF002741 MppA IPR030678 Peptide/nickel binding protein, MppA-type 13 529 2.6E-105
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 27 531 0.0
CDD cd08493 PBP2_DppA_like - - 28 516 0.0
FunFam G3DSA:3.40.190.10:FF:000036 Dipeptide ABC transporter, substrate-binding protein - - 209 299 3.9E-30
Gene3D G3DSA:3.10.105.10 - - - 289 506 0.0
FunFam G3DSA:3.10.105.10:FF:000002 Dipeptide ABC transporter, substrate-binding protein - - 290 507 8.9E-96
Gene3D G3DSA:3.40.190.10 - - - 208 520 0.0
FunFam G3DSA:3.90.76.10:FF:000002 Dipeptide ABC transporter, substrate-binding protein - - 48 208 5.9E-75
Gene3D G3DSA:3.90.76.10 - - - 42 207 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.