Pseudomonas aeruginosa PAO1, PA4503 (dppB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0042938 dipeptide transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA14_58440
ECO:0000250
sequence similarity evidence used in manual assertion
25338022 Reviewed by curator
Molecular Function GO:0071916 dipeptide transmembrane transporter activity
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
25338022 Reviewed by curator
Molecular Function GO:0042277 peptide binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA14_58350
ECO:0000250
sequence similarity evidence used in manual assertion
25338022 Reviewed by curator
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00528
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00528
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00528 Binding-protein-dependent transport system inner membrane component IPR000515 ABC transporter type 1, transmembrane domain MetI-like 114 333 2.6E-47
CDD cd06261 TM_PBP2 IPR000515 ABC transporter type 1, transmembrane domain MetI-like 99 316 4.20233E-21
Pfam PF19300 Binding-prot-dependent transport system membrane comp, N-term IPR045621 ABC transporter type 1, GsiC-like, N-terminal domain 1 100 5.4E-10
PANTHER PTHR43163 DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED - - 1 335 6.7E-128
Gene3D G3DSA:1.10.3720.10 - IPR035906 MetI-like superfamily 86 326 5.4E-24
SUPERFAMILY SSF161098 MetI-like IPR035906 MetI-like superfamily 89 319 1.37E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.