Pseudomonas aeruginosa PAO1, PA4504 (dppC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0042277 peptide binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA14_58360
ECO:0000250
sequence similarity evidence used in manual assertion
25338022 Reviewed by curator
Biological Process GO:0042938 dipeptide transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA14_58450
ECO:0000250
sequence similarity evidence used in manual assertion
25338022 Reviewed by curator
Molecular Function GO:0071916 dipeptide transmembrane transporter activity
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
25338022 Reviewed by curator
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C IPR025966 Oligopeptide transport permease C-like, N-terminal domain 18 70 1.1E-14
SUPERFAMILY SSF161098 MetI-like IPR035906 MetI-like superfamily 94 281 4.32E-29
CDD cd06261 TM_PBP2 IPR000515 ABC transporter type 1, transmembrane domain MetI-like 99 281 5.85631E-22
PANTHER PTHR43386 OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC - - 23 299 1.6E-91
Pfam PF00528 Binding-protein-dependent transport system inner membrane component IPR000515 ABC transporter type 1, transmembrane domain MetI-like 117 300 9.9E-31
FunFam G3DSA:1.10.3720.10:FF:000007 Dipeptide ABC transporter permease DppC - - 89 296 5.8E-105
Gene3D G3DSA:1.10.3720.10 - IPR035906 MetI-like superfamily 89 296 2.5E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.