Pseudomonas aeruginosa PAO1, PA4665 (prfA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003747 translation release factor activity
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
15312775 Reviewed by curator
Biological Process GO:0006415 translational termination
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
15312775 Reviewed by curator
Biological Process GO:0006415 translational termination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03462
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016149 translation release factor activity, codon specific
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00019
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003747 translation release factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00472
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.160.20 - - - 211 307 2.0E-92
Coils Coil Coil - - 77 97 -
Gene3D G3DSA:6.10.140.1950 - - - 1 108 1.3E-33
NCBIfam TIGR00019 JCVI: peptide chain release factor 1 IPR004373 Peptide chain release factor 1 1 358 0.0
FunFam G3DSA:3.30.70.1660:FF:000004 Peptide chain release factor 1 - - 280 360 3.0E-32
PANTHER PTHR43804 LD18447P - - 3 351 2.1E-121
FunFam G3DSA:3.30.160.20:FF:000004 Peptide chain release factor 1 - - 212 307 5.2E-41
Hamap MF_00093 Peptide chain release factor 1 [prfA]. IPR004373 Peptide chain release factor 1 5 359 41.407635
SUPERFAMILY SSF75620 Release factor IPR045853 Peptide chain release factor class I superfamily 12 355 0.0
SMART SM00937 PCRF_a_2 IPR005139 Peptide chain release factor 65 180 9.7E-67
FunFam G3DSA:3.30.70.1660:FF:000002 Peptide chain release factor 1 - - 109 220 1.5E-52
Pfam PF03462 PCRF domain IPR005139 Peptide chain release factor 13 205 1.6E-73
Coils Coil Coil - - 2 22 -
Gene3D G3DSA:3.30.70.1660 - - - 115 344 2.0E-92
Pfam PF00472 RF-1 domain IPR000352 Peptide chain release factor class I 215 323 2.8E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.