Pseudomonas aeruginosa PAO1, PA4667 (lbcA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF48452
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 367 | 585 | 1.6E-31 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 439 | 472 | 170.0 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 473 | 507 | 120.0 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 64 | 231 | 1.3E-6 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 370 | 403 | 160.0 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 508 | 541 | 0.055 |
| PANTHER | PTHR45586 | TPR REPEAT-CONTAINING PROTEIN PA4667 | - | - | 63 | 548 | 7.5E-29 |
| Pfam | PF13432 | Tetratricopeptide repeat | - | - | 515 | 574 | 4.7E-8 |
| Coils | Coil | Coil | - | - | 448 | 468 | - |
| Pfam | PF14559 | Tetratricopeptide repeat | - | - | 248 | 305 | 4.3E-10 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 235 | 268 | 96.0 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 303 | 336 | 170.0 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 237 | 293 | 8.4E-9 |
| SMART | SM00028 | tpr_5 | IPR019734 | Tetratricopeptide repeat | 405 | 438 | 120.0 |
| Pfam | PF13432 | Tetratricopeptide repeat | - | - | 326 | 362 | 0.009 |
| SUPERFAMILY | SSF48452 | TPR-like | IPR011990 | Tetratricopeptide-like helical domain superfamily | 240 | 574 | 3.04E-28 |
| Pfam | PF13432 | Tetratricopeptide repeat | - | - | 445 | 508 | 4.1E-5 |
| SUPERFAMILY | SSF48452 | TPR-like | IPR011990 | Tetratricopeptide-like helical domain superfamily | 126 | 226 | 3.94E-8 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 294 | 366 | 2.2E-10 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.