Pseudomonas aeruginosa PAO1, PA4916 (nrtR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4916
Name
nrtR
Replicon chromosome
Genomic location 5516399 - 5517094 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253603.1
GI 15600109
Affymetrix PA4916_at
DNASU PaCD00008126
Entrez 878462
GenBank AAG08301.1
INSDC AAG08301.1
NCBI Locus Tag PA4916
protein_id(GenBank) gb|AAG08301.1|AE004904_9|gnl|PseudoCAP|PA4916
TIGR NTL03PA04917
UniParc UPI00000C5E7A
UniProtKB Acc Q9HUP7
UniProtKB ID Q9HUP7_PSEAE
UniRef100 UniRef100_Q9HUP7
UniRef50 UniRef50_T2H7I0
UniRef90 UniRef90_Q9HUP7

Product

Feature Type CDS
Coding Frame 1
Product Name
Nudix-related transcriptional regulator NrtR
Product Name Confidence: Class 1
Synonyms hypothetical protein
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -1.62
Kyte-Doolittle Hydrophobicity Value -0.084
Molecular Weight (kDa) 25.5
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 223 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004534 (376 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4916
Search term: nrtR

Human Homologs

References

No references are associated with this feature.