Pseudomonas aeruginosa PAO1, PA4981 (lysP)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGCCGCGCCG-N36-CGGCGCGGCG | 5595268 | 5595323 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AmrZ binding site | 5594309 | 5594321 | - |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
| AmrZ binding site | 5594326 | 5594338 | + |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
| Inverted repeat: GGCCAGCGGC-N47-GCCGCTGGCC | 5593854 | 5593920 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: ACGCCCGCCG-N4-CGGCGGGCGT | 5593639 | 5593662 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1359 | 5593640 | 5593661 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Shine-Dalgarno sequence | 5593430 | 5593433 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |