Pseudomonas aeruginosa PAO1, PA0010 (tag)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008725 DNA-3-methyladenine glycosylase activity
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
3536857 Reviewed by curator
Biological Process GO:0006307 DNA dealkylation involved in DNA repair
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P05100
ECO:0000250
sequence similarity evidence used in manual assertion
3536857 Reviewed by curator
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48150
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008725 DNA-3-methyladenine glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03352
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03352
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03410 Base excision repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03352 Methyladenine glycosylase IPR005019 Methyladenine glycosylase 6 177 1.5E-70
Gene3D G3DSA:1.10.340.30 1 181 1.5E-75
TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I IPR004597 DNA-3-methyladenine glycosylase I 3 178 2.0E-88
SUPERFAMILY SSF48150 IPR011257 DNA glycosylase 1 181 2.2E-75

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.