Pseudomonas aeruginosa PAO1, PA0016 (trkA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006810 transport
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0006813 potassium ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02080
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00335
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015079 potassium ion transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00335
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008324 cation transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02080
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.70.1450:FF:000001 Trk system potassium transporter TrkA - - 141 231 1.6E-47
Pfam PF02254 TrkA-N domain IPR003148 Regulator of K+ conductance, N-terminal 234 349 2.4E-23
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 49 59 1.7E-30
Gene3D G3DSA:3.30.70.1450 - IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 141 231 5.3E-32
Pfam PF02080 TrkA-C domain IPR006037 Regulator of K+ conductance, C-terminal 388 450 8.7E-13
Gene3D G3DSA:3.40.50.720 - - - 232 365 2.4E-47
PANTHER PTHR43833 POTASSIUM CHANNEL PROTEIN 2-RELATED-RELATED - - 1 221 2.0E-83
FunFam G3DSA:3.40.50.720:FF:000042 Trk system potassium transporter TrkA - - 232 365 5.6E-63
Gene3D G3DSA:3.40.50.720 - - - 1 140 7.2E-48
Pfam PF02080 TrkA-C domain IPR006037 Regulator of K+ conductance, C-terminal 158 221 1.8E-12
FunFam G3DSA:3.30.70.1450:FF:000002 Trk system potassium transporter TrkA - - 366 457 3.9E-44
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 2 16 1.7E-30
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 60 70 1.7E-30
FunFam G3DSA:3.40.50.720:FF:000027 Trk system potassium transporter TrkA - - 1 140 1.7E-73
Gene3D G3DSA:3.30.70.1450 - IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 366 457 6.1E-37
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 19 33 1.7E-30
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 73 87 1.7E-30
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 231 375 1.84E-32
Pfam PF02254 TrkA-N domain IPR003148 Regulator of K+ conductance, N-terminal 3 105 1.2E-26
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 1 150 9.86E-35
SUPERFAMILY SSF116726 TrkA C-terminal domain-like IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 135 221 1.15E-11
SUPERFAMILY SSF116726 TrkA C-terminal domain-like IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 361 436 1.83E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.