Pseudomonas aeruginosa PAO1, PA0016 (trkA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006810 transport
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Molecular Function GO:0015079 potassium ion transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00335
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00335
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006813 potassium ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF116726
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008324 cation transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51202
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02080 TrkA-C domain IPR006037 Regulator of K+ conductance, C-terminal 156 221 2.6E-12
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 19 33 1.7E-30
ProSiteProfiles PS51201 RCK N-terminal domain profile. IPR003148 Regulator of K+ conductance, N-terminal 233 353 15.315
Gene3D G3DSA:3.40.50.720 2 138 5.8E-47
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 2 16 1.7E-30
Gene3D G3DSA:3.30.70.1450 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 366 457 2.4E-30
SUPERFAMILY SSF116726 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 361 436 1.83E-9
Pfam PF02254 TrkA-N domain IPR003148 Regulator of K+ conductance, N-terminal 234 349 2.6E-23
ProSiteProfiles PS51202 RCK C-terminal domain profile. IPR006037 Regulator of K+ conductance, C-terminal 367 452 15.497
SUPERFAMILY SSF51735 IPR036291 NAD(P)-binding domain superfamily 1 150 9.86E-35
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 49 59 1.7E-30
Gene3D G3DSA:3.30.70.1450 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 139 231 6.2E-24
Pfam PF02254 TrkA-N domain IPR003148 Regulator of K+ conductance, N-terminal 3 105 1.4E-26
Gene3D G3DSA:3.40.50.720 232 365 3.9E-35
Pfam PF02080 TrkA-C domain IPR006037 Regulator of K+ conductance, C-terminal 389 450 1.6E-12
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 73 87 1.7E-30
ProSiteProfiles PS51201 RCK N-terminal domain profile. IPR003148 Regulator of K+ conductance, N-terminal 2 130 16.964
SUPERFAMILY SSF116726 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 135 221 1.15E-11
SUPERFAMILY SSF51735 IPR036291 NAD(P)-binding domain superfamily 231 375 1.84E-32
ProSiteProfiles PS51202 RCK C-terminal domain profile. IPR006037 Regulator of K+ conductance, C-terminal 142 226 14.558
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 60 70 1.7E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.