Pseudomonas aeruginosa PAO1, PA0024 (hemF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015994 chlorophyll metabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Molecular Function GO:0004109 coproporphyrinogen oxidase activity
IGI
Inferred from Genetic Interaction
ECO:0000316
genetic interaction evidence used in manual assertion
9767567 Reviewed by curator
Biological Process GO:0051188 cofactor biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Molecular Function GO:0004109 coproporphyrinogen oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000166
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000166
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006779 porphyrin-containing compound biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000166
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Porphyrin and chlorophyll metabolism ECO:0000037
not_recorded
KEGG pae00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 30 46 5.1E-88
Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. IPR001260 Coproporphyrinogen III oxidase, aerobic 2 276 56.337
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 161 190 5.1E-88
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 89 113 5.1E-88
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 47 68 5.1E-88
PIRSF PIRSF000166 IPR001260 Coproporphyrinogen III oxidase, aerobic 1 302 5.4E-128
SUPERFAMILY SSF102886 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily 3 301 0.0
Gene3D G3DSA:3.40.1500.10 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily 1 301 0.0
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 124 146 5.1E-88
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 233 260 5.1E-88
Pfam PF01218 Coproporphyrinogen III oxidase IPR001260 Coproporphyrinogen III oxidase, aerobic 8 301 0.0
ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. IPR018375 Coproporphyrinogen III oxidase, conserved site 165 189 -
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 261 287 5.1E-88

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.