Pseudomonas aeruginosa UCBPP-PA14, PA14_00190 (fmt)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0022898 regulation of transmembrane transporter activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0018
ECO:0000249
sequence similarity evidence used in automatic assertion
19786597
Molecular Function GO:0016742 hydroxymethyl-, formyl- and related transferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02911
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004479 methionyl-tRNA formyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00182
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02911
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00182
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50486
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class
Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00670 One carbon pool by folate 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00551 Formyl transferase IPR002376 Formyl transferase, N-terminal 6 184 4.8E-47
SUPERFAMILY SSF53328 IPR036477 Formyl transferase, N-terminal domain superfamily 5 207 2.62E-67
SUPERFAMILY SSF50486 IPR011034 Formyl transferase-like, C-terminal domain superfamily 208 308 5.3E-31
Gene3D G3DSA:3.10.25.10 IPR037022 Formyl transferase, C-terminal domain superfamily 210 312 1.3E-28
ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. IPR001555 Phosphoribosylglycinamide formyltransferase, active site 136 159 -
CDD cd08646 FMT_core_Met-tRNA-FMT_N IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain 5 208 3.31839E-112
Pfam PF02911 Formyl transferase, C-terminal domain IPR005793 Formyl transferase, C-terminal 207 302 1.2E-25
Gene3D G3DSA:3.40.50.170 1 209 1.8E-81
TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase IPR005794 Methionyl-tRNA formyltransferase 5 306 6.1E-95
Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. IPR005794 Methionyl-tRNA formyltransferase 5 305 37.043
CDD cd08704 Met_tRNA_FMT_C 211 294 2.17402E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.