Pseudomonas aeruginosa UCBPP-PA14, PA14_00240

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003725 double-stranded RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01852
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0002949 tRNA threonylcarbamoyladenosine modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01852
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS51163 YrdC-like domain profile. IPR006070 YrdC-like domain 4 185 21.762
Pfam PF01300 Telomere recombination IPR006070 YrdC-like domain 13 184 4.8E-43
Gene3D G3DSA:3.90.870.10 3 183 4.7E-55
SUPERFAMILY SSF55821 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily 7 184 1.46E-52
Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. IPR023535 Threonylcarbamoyl-AMP synthase 4 183 38.39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.