Pseudomonas aeruginosa UCBPP-PA14, PA14_00280 (hemF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004109 coproporphyrinogen oxidase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0024
ECO:0000249
sequence similarity evidence used in automatic assertion
9767567
Molecular Function GO:0004109 coproporphyrinogen oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000166
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000166
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006779 porphyrin-containing compound biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000166
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01218 Coproporphyrinogen III oxidase IPR001260 Coproporphyrinogen III oxidase, aerobic 8 301 0.0
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 47 68 5.1E-88
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 161 190 5.1E-88
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 89 113 5.1E-88
ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. IPR018375 Coproporphyrinogen III oxidase, conserved site 165 189 -
Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. IPR001260 Coproporphyrinogen III oxidase, aerobic 2 276 56.337
Gene3D G3DSA:3.40.1500.10 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily 1 301 0.0
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 30 46 5.1E-88
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 124 146 5.1E-88
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 261 287 5.1E-88
PRINTS PR00073 Coprogen oxidase signature IPR001260 Coproporphyrinogen III oxidase, aerobic 233 260 5.1E-88
PIRSF PIRSF000166 IPR001260 Coproporphyrinogen III oxidase, aerobic 1 302 5.4E-128
SUPERFAMILY SSF102886 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily 3 301 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.