Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 5 | 84 | 1.19E-20 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 88 | 294 | 1.86E-51 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 1 | 85 | 3.5E-22 |
CDD | cd08422 | PBP2_CrgA_like | - | - | 92 | 287 | 3.48107E-78 |
FunFam | G3DSA:3.40.190.290:FF:000001 | Transcriptional regulator, LysR family | - | - | 88 | 290 | 5.2E-70 |
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 4 | 294 | 6.4E-89 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 88 | 291 | 1.8E-67 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 3 | 87 | 1.0E-21 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 88 | 291 | 1.0E-45 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 7 | 62 | 7.8E-18 |