Pseudomonas aeruginosa UCBPP-PA14, PA14_01160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 614 678 -
SUPERFAMILY SSF69279 Phage tail proteins - - 189 363 6.8E-37
SUPERFAMILY SSF69349 Phage fibre proteins - - 580 723 8.63E-24
MobiDBLite mobidb-lite consensus disorder prediction - - 465 485 -
FunFam G3DSA:2.40.50.230:FF:000001 Type VI secretion protein VgrG - - 355 457 1.3E-61
Gene3D G3DSA:3.55.50.10 - - - 98 189 0.0
Gene3D G3DSA:4.10.220.110 - - - 224 286 0.0
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 355 457 6.4E-46
MobiDBLite mobidb-lite consensus disorder prediction - - 614 669 -
SUPERFAMILY SSF69349 Phage fibre proteins - - 442 603 1.02E-47
Pfam PF05954 Phage tail baseplate hub (GPD) - - 29 329 1.5E-105
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 386 453 9.0E-15
SUPERFAMILY SSF69279 Phage tail proteins - - 11 184 1.11E-63
Pfam PF06715 Gp5 C-terminal repeat (3 copies) IPR010609 Gp5, C-terminal 537 560 4.7E-5
FunFam G3DSA:4.10.220.110:FF:000001 VgrG1 - - 224 286 4.7E-31
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 11 524 0.0
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 365 452 1.7E-35
Gene3D G3DSA:2.30.110.50 - - - 15 333 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 465 483 -
FunFam G3DSA:3.55.50.10:FF:000001 Actin cross-linking toxin VgrG1 - - 98 189 3.1E-44
PANTHER PTHR32305 - - - 15 660 4.4E-98
Pfam PF06715 Gp5 C-terminal repeat (3 copies) IPR010609 Gp5, C-terminal 633 656 6.0E-5
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 22 506 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.