Pseudomonas aeruginosa UCBPP-PA14, PA14_02830 (pcaB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0047472 3-carboxy-cis,cis-muconate cycloisomerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02426
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00163
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019619 3,4-dihydroxybenzoate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02426
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
UniPathway UPA00074 IMP biosynthesis via de novo pathway InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00250 Alanine, aspartate and glutamate metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pau01220 Degradation of aromatic compounds 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00230 Purine metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00362 Benzoate degradation InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
UniPathway UPA00075 AMP biosynthesis via de novo pathway InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 234 261 8.8E-25
PRINTS PR00145 Argininosuccinate lyase family signature 234 258 1.7E-13
Pfam PF10397 Adenylosuccinate lyase C-terminus IPR019468 Adenylosuccinate lyase C-terminal 368 445 8.8E-20
PRINTS PR00145 Argininosuccinate lyase family signature 144 164 1.7E-13
Gene3D G3DSA:1.20.200.10 109 364 1.2E-103
CDD cd01597 pCLME 9 448 0.0
PRINTS PR00145 Argininosuccinate lyase family signature 103 125 1.7E-13
Coils Coil 119 146 -
PRINTS PR00145 Argininosuccinate lyase family signature 193 209 1.7E-13
ProSitePatterns PS00163 Fumarate lyases signature. IPR020557 Fumarate lyase, conserved site 279 288 -
SMART SM00998 IPR019468 Adenylosuccinate lyase C-terminal 367 446 5.4E-29
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 149 167 8.8E-25
Pfam PF00206 Lyase IPR022761 Fumarate lyase, N-terminal 15 304 3.4E-67
Gene3D G3DSA:1.10.275.10 IPR024083 Fumarase/histidase, N-terminal 6 108 6.2E-36
Coils Coil 342 362 -
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 279 295 8.8E-25
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 104 122 8.8E-25
PRINTS PR00145 Argininosuccinate lyase family signature 279 295 1.7E-13
TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase IPR012789 3-carboxy-cis,cis-muconate cycloisomerase 9 352 4.9E-141
SUPERFAMILY SSF48557 IPR008948 L-Aspartase-like 9 449 6.75E-125
Gene3D G3DSA:1.10.40.30 366 453 2.0E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.