Pseudomonas aeruginosa UCBPP-PA14, PA14_02830 (pcaB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019619 3,4-dihydroxybenzoate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02426
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48557
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc inosine-5'-phosphate biosynthesis III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01220 Degradation of aromatic compounds 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc inosine-5'-phosphate biosynthesis I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pau00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc inosine-5'-phosphate biosynthesis II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc adenosine ribonucleotides <i>de novo</i> biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF10397 Adenylosuccinate lyase C-terminus IPR019468 Adenylosuccinate lyase C-terminal 368 445 1.2E-19
PRINTS PR00145 Argininosuccinate lyase family signature - - 279 295 1.7E-13
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 104 122 8.8E-25
PRINTS PR00145 Argininosuccinate lyase family signature - - 193 209 1.7E-13
Gene3D G3DSA:1.10.40.30 - - - 367 453 2.7E-30
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 279 295 8.8E-25
PRINTS PR00145 Argininosuccinate lyase family signature - - 234 258 1.7E-13
PRINTS PR00145 Argininosuccinate lyase family signature - - 144 164 1.7E-13
Gene3D G3DSA:1.20.200.10 Fumarase/aspartase (Central domain) - - 3 366 4.2E-118
FunFam G3DSA:1.20.200.10:FF:000014 3-carboxy-cis,cis-muconate cycloisomerase - - 2 364 0.0
FunFam G3DSA:1.10.40.30:FF:000007 Adenylosuccinate lyase - - 367 448 8.7E-24
NCBIfam TIGR02426 JCVI: 3-carboxy-cis,cis-muconate cycloisomerase IPR012789 3-carboxy-cis,cis-muconate cycloisomerase-like 9 352 0.0
CDD cd01597 pCLME - - 9 448 0.0
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 234 261 8.8E-25
SMART SM00998 ADSL_C_2 IPR019468 Adenylosuccinate lyase C-terminal 367 446 5.4E-29
Coils Coil Coil - - 119 146 -
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 149 167 8.8E-25
Pfam PF00206 Lyase IPR022761 Fumarate lyase, N-terminal 15 304 2.1E-67
SUPERFAMILY SSF48557 L-aspartase-like IPR008948 L-Aspartase-like 9 449 6.75E-125
Coils Coil Coil - - 342 362 -
PRINTS PR00145 Argininosuccinate lyase family signature - - 103 125 1.7E-13
PANTHER PTHR43172 ADENYLOSUCCINATE LYASE - - 6 451 6.7E-122

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.