Pseudomonas aeruginosa UCBPP-PA14, PA14_03040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 260 488 8.2E-9
PANTHER PTHR23501 MAJOR FACILITATOR SUPERFAMILY - - 12 484 2.0E-124
PRINTS PR01036 Tetracycline resistance protein TetB signature - - 203 221 1.4E-12
PRINTS PR01036 Tetracycline resistance protein TetB signature - - 17 41 1.4E-12
PRINTS PR01036 Tetracycline resistance protein TetB signature - - 137 161 1.4E-12
PRINTS PR01036 Tetracycline resistance protein TetB signature - - 107 127 1.4E-12
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 18 410 4.1E-55
FunFam G3DSA:1.20.1720.10:FF:000004 EmrB/QacA family drug resistance transporter - - 15 224 2.9E-78
PRINTS PR01036 Tetracycline resistance protein TetB signature - - 401 420 1.4E-12
CDD cd17502 MFS_Azr1_MDR_like - - 18 421 1.73475E-110
Gene3D G3DSA:1.20.1720.10 Multidrug resistance protein D - - 14 228 1.5E-55
NCBIfam TIGR00711 JCVI: DHA2 family efflux MFS transporter permease subunit IPR004638 Drug resistance transporter EmrB-like 15 419 7.1E-75
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 8 485 2.75E-67

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.