Pseudomonas aeruginosa UCBPP-PA14, PA14_06650 (nirN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_06650
Name
nirN
Replicon chromosome
Genomic location 581088 - 582569 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 4 transposon mutants in orthologs

Cross-References

RefSeq YP_788679.1
GI 116054235
Entrez 4383875
INSDC ABJ15471.1
NCBI Locus Tag PA14_06650
UniParc UPI000045D425
UniProtKB Acc Q02TQ7
UniProtKB ID Q02TQ7_PSEAB
UniRef100 UniRef100_S0HQB4
UniRef50 UniRef50_F8GTF5
UniRef90 UniRef90_A6UYX0

Product

Feature Type CDS
Coding Frame 1
Product Name
c-type cytochrome
Synonyms
Evidence for Translation
Charge (pH 7) 3.79
Kyte-Doolittle Hydrophobicity Value -0.203
Molecular Weight (kDa) 54.0
Isoelectric Point (pI) 7.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6RTD OXIDOREDUCTASE 05/23/19 Dihydro-heme d1 dehydrogenase NirN in complex with DHE Pseudomonas aeruginosa 2.36 X-RAY DIFFRACTION 99.6
6RTE OXIDOREDUCTASE 05/23/19 Dihydro-heme d1 dehydrogenase NirN in complex with DHE Pseudomonas aeruginosa 1.94 X-RAY DIFFRACTION 99.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 57 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000494 (709 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_06650
Search term: nirN
Search term: c-type cytochrome

Human Homologs

References

No references are associated with this feature.