Pseudomonas aeruginosa UCBPP-PA14, PA14_09730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR12128
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00261 Monobactam biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP L-lysine biosynthesis via DAP pathway; tetrahydrodipicolinate from L-aspartate: step 3 ECO:0000037
not_recorded
KEGG pau00300 Lysine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 1 290 6.6E-82
Pfam PF00701 Dihydrodipicolinate synthetase family IPR002220 DapA-like 2 287 1.3E-55
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 129 146 8.6E-15
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 36 57 8.6E-15
PANTHER PTHR12128 DIHYDRODIPICOLINATE SYNTHASE IPR002220 DapA-like 2 290 1.4E-59
PIRSF PIRSF001365 DHDPS IPR002220 DapA-like 1 299 6.7E-81
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 72 90 8.6E-15
SMART SM01130 DHDPS_2 IPR002220 DapA-like 2 290 1.9E-90
CDD cd00408 DHDPS-like - - 6 286 1.49541E-97
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 104 120 8.6E-15
SUPERFAMILY SSF51569 Aldolase - - 1 289 5.13E-84

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.