Pseudomonas aeruginosa UCBPP-PA14, PA14_09730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01130
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.20.20.70
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008152 metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01130
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00300 Lysine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP L-lysine biosynthesis via DAP pathway; tetrahydrodipicolinate from L-aspartate: step 3 ECO:0000037
not_recorded
KEGG pau00261 Monobactam biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF001365 IPR002220 DapA-like 1 299 1.6E-80
SUPERFAMILY SSF51569 1 289 5.13E-84
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 36 57 8.6E-15
Pfam PF00701 Dihydrodipicolinate synthetase family IPR002220 DapA-like 2 287 1.2E-55
SMART SM01130 IPR002220 DapA-like 2 290 1.9E-90
CDD cd00408 DHDPS-like 6 286 1.07478E-97
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 72 90 8.6E-15
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 104 120 8.6E-15
Gene3D G3DSA:3.20.20.70 IPR013785 Aldolase-type TIM barrel 2 292 7.0E-82
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 129 146 8.6E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.