Pseudomonas aeruginosa UCBPP-PA14, PA14_37900 (sppR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest |
| Locus Tag |
PA14_37900
|
| Name |
sppR
|
| Replicon | chromosome |
| Genomic location | 3380385 - 3382925 (- strand) |
| Transposon Mutants | 2 transposon mutants in UCBPP-PA14 |
| Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
Cross-References
| RefSeq | YP_791181.1 |
| GI | 116050006 |
| Entrez | 4382347 |
| NCBI Locus Tag | PA14_37900 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
TonB-dependent receptor, SppR
|
| Synonyms |
TonB-dependent receptor |
| Evidence for Translation | |
| Charge (pH 7) | -14.00 |
| Kyte-Doolittle Hydrophobicity Value | -0.650 |
| Molecular Weight (kDa) | 93.8 |
| Isoelectric Point (pI) | 5.08 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 298 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003392 (315 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA14_37900
Search term: sppR
Search term: TonB-dependent receptor, SppR
|
Human Homologs
References
|
Swarming motility is modulated by expression of the putative xenosiderophore transporter SppR-SppABCD in Pseudomonas aeruginosa PA14.
Pletzer D, Braun Y, Weingart H
Antonie Van Leeuwenhoek 2016 Jun;109(6):737-53
PubMed ID: 26995781
|