Pseudomonas aeruginosa UCBPP-PA14, PA14_58440 (dppB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0042277 peptide binding
TAS
Traceable Author Statement
ECO:0000304
traceable author statement used in manual assertion
25338022 Reviewed by curator
Biological Process GO:0042938 dipeptide transport
IGI
Inferred from Genetic Interaction
ECO:0000012
functional complementation evidence
25338022 Reviewed by curator
Biological Process GO:0042938 dipeptide transport
IMP
Inferred from Mutant Phenotype
Term mapped from: dppB
ECO:0000315
mutant phenotype evidence used in manual assertion
25338022 Reviewed by curator
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00528
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00528
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other UCBPP-PA14 genes in this class
Transport of small molecules Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00528 Binding-protein-dependent transport system inner membrane component IPR000515 ABC transporter type 1, transmembrane domain MetI-like 114 333 1.2E-47
Gene3D G3DSA:1.10.3720.10 - IPR035906 MetI-like superfamily 87 326 8.5E-24
CDD cd06261 TM_PBP2 IPR000515 ABC transporter type 1, transmembrane domain MetI-like 96 323 4.94833E-22
SUPERFAMILY SSF161098 MetI-like IPR035906 MetI-like superfamily 89 319 1.5E-21
Pfam PF19300 Binding-prot-dependent transport system membrane comp, N-term IPR045621 ABC transporter type 1, GsiC-like, N-terminal domain 1 102 2.4E-10
PANTHER PTHR43163 DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED - - 1 335 4.6E-128

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.